CRAN Package Check Results for Maintainer ‘Pepijn de Vries <pepijn.devries at outlook.com>’

Last updated on 2024-12-26 13:49:53 CET.

Package ERROR WARN NOTE OK
adfExplorer 13
AmigaFFH 6 2 5
CopernicusMarine 1 12
csquares 1 12
ECOTOXr 13
ggfields 13
ggsankeyfier 13
ProTrackR 3 10
ProTrackR2 13

Package adfExplorer

Current CRAN status: OK: 13

Additional issues

clang-UBSAN gcc-ASAN gcc-UBSAN rchk valgrind

Package AmigaFFH

Current CRAN status: WARN: 6, NOTE: 2, OK: 5

Version: 0.4.5
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: play.Rd: tuneR Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-windows-x86_64

Version: 0.4.5
Check: dependencies in R code
Result: WARN Missing or unexported object: ‘adfExplorer::get.adf.file’ Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64, r-oldrel-windows-x86_64

Version: 0.4.5
Check: Rd cross-references
Result: WARN Missing link(s) in Rd file 'AmigaBasicBMAP-io.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'rawToAmigaBitmapFontSet.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'read.AmigaBasic.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'read.AmigaBasicShape.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'read.AmigaBitmapFont.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ ‘[adfExplorer:amigaDisk-class]{adfExplorer::amigaDisk-class()}’ Missing link(s) in Rd file 'read.AmigaBitmapFontSet.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ ‘[adfExplorer:amigaDisk-class]{adfExplorer::amigaDisk-class()}’ Missing link(s) in Rd file 'read.AmigaIcon.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'read.SysConfig.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'read.iff.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'write.AmigaBasic.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'write.AmigaBasicShape.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'write.AmigaBitmapFont.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'write.AmigaIcon.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'write.SysConfig.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'write.iff.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ See section 'Cross-references' in the 'Writing R Extensions' manual. Found the following Rd file(s) with Rd \link{} targets missing package anchors: play.Rd: tuneR Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.4.5
Check: Rd cross-references
Result: WARN Missing link(s) in Rd file 'AmigaBasicBMAP-io.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'rawToAmigaBitmapFontSet.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'read.AmigaBasic.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'read.AmigaBasicShape.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'read.AmigaBitmapFont.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ ‘[adfExplorer:amigaDisk-class]{adfExplorer::amigaDisk-class()}’ Missing link(s) in Rd file 'read.AmigaBitmapFontSet.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ ‘[adfExplorer:amigaDisk-class]{adfExplorer::amigaDisk-class()}’ Missing link(s) in Rd file 'read.AmigaIcon.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'read.SysConfig.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'read.iff.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'write.AmigaBasic.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'write.AmigaBasicShape.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'write.AmigaBitmapFont.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'write.AmigaIcon.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'write.SysConfig.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link(s) in Rd file 'write.iff.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ See section 'Cross-references' in the 'Writing R Extensions' manual. Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.4.5
Check: Rd cross-references
Result: WARN Missing link or links in Rd file 'AmigaBasicBMAP-io.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link or links in Rd file 'rawToAmigaBitmapFontSet.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link or links in Rd file 'read.AmigaBasic.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link or links in Rd file 'read.AmigaBasicShape.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link or links in Rd file 'read.AmigaBitmapFont.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ ‘[adfExplorer:amigaDisk-class]{adfExplorer::amigaDisk-class()}’ Missing link or links in Rd file 'read.AmigaBitmapFontSet.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ ‘[adfExplorer:amigaDisk-class]{adfExplorer::amigaDisk-class()}’ Missing link or links in Rd file 'read.AmigaIcon.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link or links in Rd file 'read.SysConfig.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link or links in Rd file 'read.iff.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link or links in Rd file 'write.AmigaBasic.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link or links in Rd file 'write.AmigaBasicShape.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link or links in Rd file 'write.AmigaBitmapFont.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link or links in Rd file 'write.AmigaIcon.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link or links in Rd file 'write.SysConfig.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ Missing link or links in Rd file 'write.iff.Rd': ‘[adfExplorer:amigaDisk-class]{amigaDisk()}’ See section 'Cross-references' in the 'Writing R Extensions' manual. Flavors: r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.4.5
Check: Rd cross-references
Result: WARN Missing link or links in documentation object 'AmigaBasicBMAP-io.Rd': '[adfExplorer:amigaDisk-class]{amigaDisk()}' Missing link or links in documentation object 'rawToAmigaBitmapFontSet.Rd': '[adfExplorer:amigaDisk-class]{amigaDisk()}' Missing link or links in documentation object 'read.AmigaBasic.Rd': '[adfExplorer:amigaDisk-class]{amigaDisk()}' Missing link or links in documentation object 'read.AmigaBasicShape.Rd': '[adfExplorer:amigaDisk-class]{amigaDisk()}' Missing link or links in documentation object 'read.AmigaBitmapFont.Rd': '[adfExplorer:amigaDisk-class]{amigaDisk()}' '[adfExplorer:amigaDisk-class]{adfExplorer::amigaDisk-class()}' Missing link or links in documentation object 'read.AmigaBitmapFontSet.Rd': '[adfExplorer:amigaDisk-class]{amigaDisk()}' '[adfExplorer:amigaDisk-class]{adfExplorer::amigaDisk-class()}' Missing link or links in documentation object 'read.AmigaIcon.Rd': '[adfExplorer:amigaDisk-class]{amigaDisk()}' Missing link or links in documentation object 'read.SysConfig.Rd': '[adfExplorer:amigaDisk-class]{amigaDisk()}' Missing link or links in documentation object 'read.iff.Rd': '[adfExplorer:amigaDisk-class]{amigaDisk()}' Missing link or links in documentation object 'write.AmigaBasic.Rd': '[adfExplorer:amigaDisk-class]{amigaDisk()}' Missing link or links in documentation object 'write.AmigaBasicShape.Rd': '[adfExplorer:amigaDisk-class]{amigaDisk()}' Missing link or links in documentation object 'write.AmigaBitmapFont.Rd': '[adfExplorer:amigaDisk-class]{amigaDisk()}' Missing link or links in documentation object 'write.AmigaIcon.Rd': '[adfExplorer:amigaDisk-class]{amigaDisk()}' Missing link or links in documentation object 'write.SysConfig.Rd': '[adfExplorer:amigaDisk-class]{amigaDisk()}' Missing link or links in documentation object 'write.iff.Rd': '[adfExplorer:amigaDisk-class]{amigaDisk()}' See section 'Cross-references' in the 'Writing R Extensions' manual. Flavor: r-oldrel-windows-x86_64

Package CopernicusMarine

Current CRAN status: ERROR: 1, OK: 12

Version: 0.2.4
Check: package dependencies
Result: ERROR Package required but not available: ‘leaflet’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-devel-linux-x86_64-debian-clang

Package csquares

Current CRAN status: ERROR: 1, OK: 12

Version: 0.1.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘csquares-objects.Rmd’ using rmarkdown --- finished re-building ‘csquares-objects.Rmd’ --- re-building ‘ices.Rmd’ using rmarkdown Quitting from lines 43-59 [ices_plot] (ices.Rmd) Error: processing vignette 'ices.Rmd' failed with diagnostics: there is no package called 'rnaturalearth' --- failed re-building ‘ices.Rmd’ --- re-building ‘tidy.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/csquares.Rcheck/vign_test/csquares/vignettes/tidy_files/figure-html/mutate-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 12504 bytes Input file size = 12594 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10378 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 10378 Output IDAT size = 10378 bytes (2126 bytes decrease) Output file size = 10456 bytes (2138 bytes = 16.98% decrease) --- finished re-building ‘tidy.Rmd’ --- re-building ‘wildcards.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/csquares.Rcheck/vign_test/csquares/vignettes/wildcards_files/figure-html/filter-1.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 33104 bytes Input file size = 33230 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24491 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24491 Output IDAT size = 24491 bytes (8613 bytes decrease) Output file size = 24569 bytes (8661 bytes = 26.06% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/csquares.Rcheck/vign_test/csquares/vignettes/wildcards_files/figure-html/filter-2.png 288x288 pixels, 3x8 bits/pixel, RGB Input IDAT size = 11926 bytes Input file size = 12016 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8706 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8706 Output IDAT size = 8706 bytes (3220 bytes decrease) Output file size = 8784 bytes (3232 bytes = 26.90% decrease) --- finished re-building ‘wildcards.Rmd’ SUMMARY: processing the following file failed: ‘ices.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Package ECOTOXr

Current CRAN status: OK: 13

Package ggfields

Current CRAN status: OK: 13

Package ggsankeyfier

Current CRAN status: OK: 13

Package ProTrackR

Current CRAN status: NOTE: 3, OK: 10

Version: 0.4.3
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: playWave.Rd: tuneR Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Package ProTrackR2

Current CRAN status: OK: 13

Additional issues

rchk