Evolutionary Algorithm

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Documentation for package ‘evola’ version 1.0.5

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

A	Genotypic and Phenotypic data for a CP population
A.mat	Additive relationship matrix
addZeros	Function to add zeros before and after a numeric vector to have the same number of characters.
A_wheat	wheat lines dataset
bestSol	Extract the index of the best solution
DT_cpdata	Genotypic and Phenotypic data for a CP population
DT_technow	Genotypic and Phenotypic data from single cross hybrids (Technow et al.,2014)
DT_wheat	wheat lines dataset
evola	*EVOL*utionary *A*lgorithm
evolafit	Fits a genetic algorithm for a set of traits and constraints.
evolaPop	Genetic algorithm pop
evolaPop-class	Genetic algorithm pop
GT_wheat	wheat lines dataset
importHaploSparse	Import haplotypes
inbFun	Fitness function from contribution theory using only the group relationship
Jc	Matrix of ones
Jr	Matrix of ones
logspace	Decreasing exponential trend
M_technow	Genotypic and Phenotypic data from single cross hybrids (Technow et al.,2014)
nQtl	Matrix of number of activated QTLs
ocsFun	Fitness function from contribution theory
overlay	Overlay Matrix
pareto	plot the change of values across iterations
pmonitor	plot the change of values across iterations
regFun	Fitness function from linear regressions based on mean squared error.
stan	Standardize a vector of values in range 0 to 1
update.evolaFitMod	update form an evolafit model
varQ	Extract the variance existing in the genome solutions