Last updated on 2025-07-02 18:53:08 CEST.
| Package | ERROR | OK |
|---|---|---|
| mapi | 2 | 11 |
Current CRAN status: ERROR: 2, OK: 11
Version: 1.1.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [62s/91s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.473, system: 0.037, elapsed: 2.972 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.953, system: 0.079, elapsed: 16.205 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.015, elapsed: 0.371 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.772, system: 0.219, elapsed: 6.889 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.005, elapsed: 0.308 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.089, system: 0.378, elapsed: 27.795 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.468, system: 0.032, elapsed: 2.399 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.986, system: 0.087, elapsed: 12.971 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.285 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.734, system: 0.177, elapsed: 5.070 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.004, elapsed: 0.196 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.077, system: 0.336, elapsed: 21.779 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.509, system: 0.032, elapsed: 1.737 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.858, system: 0.067, elapsed: 11.034 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.011, elapsed: 0.279 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.653, system: 0.215, elapsed: 4.677 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.006, elapsed: 0.221 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.079, system: 0.631, elapsed: 14.310 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.064, system: 0.988, elapsed: 33.073 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 18 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 18 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [60s/82s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.521, system: 0.039, elapsed: 2.953 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.967, system: 0.083, elapsed: 16.044 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.015, elapsed: 0.307 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.573, system: 0.197, elapsed: 6.136 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.003, elapsed: 0.265 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.928, system: 0.356, elapsed: 26.627 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.524, system: 0.036, elapsed: 2.277 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.005, system: 0.081, elapsed: 13.416 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.014, elapsed: 0.226 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.506, system: 0.168, elapsed: 3.974 seconds]
Computing values for grid cells...
... done. [user: 0.153, system: 0.003, elapsed: 0.170 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.898, system: 0.320, elapsed: 20.771 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.521, system: 0.026, elapsed: 1.617 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.786, system: 0.064, elapsed: 9.865 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.010, elapsed: 0.216 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.466, system: 0.158, elapsed: 4.571 seconds]
Computing values for grid cells...
... done. [user: 0.155, system: 0.003, elapsed: 0.172 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.659, system: 0.447, elapsed: 11.115 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.384, system: 0.731, elapsed: 28.282 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 18 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 18 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64