CRAN Package Check Results for Maintainer ‘Steven L. Scott <steve.the.bayesian at gmail.com>’

Last updated on 2025-01-03 01:49:05 CET.

Package ERROR NOTE OK
Boom 8 5
BoomSpikeSlab 7 6
bsts 1 9 3

Package Boom

Current CRAN status: NOTE: 8, OK: 5

Version: 0.9.15
Check: for GNU extensions in Makefiles
Result: NOTE GNU make is a SystemRequirements. Flavors: r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 0.9.15
Check: installed package size
Result: NOTE installed size is 403.5Mb sub-directories of 1Mb or more: include 10.3Mb lib 392.8Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package BoomSpikeSlab

Current CRAN status: NOTE: 7, OK: 6

Additional issues

rchk

Version: 1.2.6
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: nnet.Rd: MvnPrior suggest.burn.Rd: SuggestBurnLogLikelihood Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Version: 1.2.6
Check: installed package size
Result: NOTE installed size is 93.4Mb sub-directories of 1Mb or more: libs 92.8Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Package bsts

Current CRAN status: ERROR: 1, NOTE: 9, OK: 3

Additional issues

rchk

Version: 0.9.10
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: add.dynamic.regression.Rd: SdPrior add.monthly.annual.cycle.Rd: zoo bsts.Rd: zoo descriptive-plots.Rd: zoo, yearmon mbsts.Rd: SpikeSlabPrior plot.bsts.mixed.Rd: TimeSeriesBoxplot to.posixt.Rd: yearmon wide.to.long.Rd: zoo Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Version: 0.9.10
Check: examples
Result: ERROR Running examples in ‘bsts-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: regression.holiday > ### Title: Regression Based Holiday Models > ### Aliases: AddRegressionHoliday RegressionHolidayStateModel > ### AddHierarchicalRegressionHoliday > ### HierarchicalRegressionHolidayStateModel > ### Keywords: models > > ### ** Examples > > trend <- cumsum(rnorm(730, 0, .1)) > dates <- seq.Date(from = as.Date("2014-01-01"), length = length(trend), by = "day") > y <- zoo(trend + rnorm(length(trend), 0, .2), dates) > > AddHolidayEffect <- function(y, dates, effect) { + ## Adds a holiday effect to simulated data. + ## Args: + ## y: A zoo time series, with Dates for indices. + ## dates: The dates of the holidays. + ## effect: A vector of holiday effects of odd length. The central effect is + ## the main holiday, with a symmetric influence window on either side. + ## Returns: + ## y, with the holiday effects added. + time <- dates - (length(effect) - 1) / 2 + for (i in 1:length(effect)) { + y[time] <- y[time] + effect[i] + time <- time + 1 + } + return(y) + } > > ## Define some holidays. > memorial.day <- NamedHoliday("MemorialDay") > memorial.day.effect <- c(.3, 3, .5) > memorial.day.dates <- as.Date(c("2014-05-26", "2015-05-25")) > y <- AddHolidayEffect(y, memorial.day.dates, memorial.day.effect) > > presidents.day <- NamedHoliday("PresidentsDay") > presidents.day.effect <- c(.5, 2, .25) > presidents.day.dates <- as.Date(c("2014-02-17", "2015-02-16")) > y <- AddHolidayEffect(y, presidents.day.dates, presidents.day.effect) > > labor.day <- NamedHoliday("LaborDay") > labor.day.effect <- c(1, 2, 1) > labor.day.dates <- as.Date(c("2014-09-01", "2015-09-07")) > y <- AddHolidayEffect(y, labor.day.dates, labor.day.effect) > > ## The holidays can be in any order. > holiday.list <- list(memorial.day, labor.day, presidents.day) > > ## In a real example you'd want more than 100 MCMC iterations. > niter <- 100 > > ## Fit the model > ss <- AddLocalLevel(list(), y) > ss <- AddRegressionHoliday(ss, y, holiday.list = holiday.list) > model <- bsts(y, state.specification = ss, niter = niter) =-=-=-=-= Iteration 0 Wed Jan 1 20:53:55 2025 =-=-=-=-= =-=-=-=-= Iteration 10 Wed Jan 1 20:53:55 2025 =-=-=-=-= =-=-=-=-= Iteration 20 Wed Jan 1 20:53:55 2025 =-=-=-=-= =-=-=-=-= Iteration 30 Wed Jan 1 20:53:55 2025 =-=-=-=-= =-=-=-=-= Iteration 40 Wed Jan 1 20:53:55 2025 =-=-=-=-= =-=-=-=-= Iteration 50 Wed Jan 1 20:53:55 2025 =-=-=-=-= =-=-=-=-= Iteration 60 Wed Jan 1 20:53:55 2025 =-=-=-=-= =-=-=-=-= Iteration 70 Wed Jan 1 20:53:55 2025 =-=-=-=-= =-=-=-=-= Iteration 80 Wed Jan 1 20:53:55 2025 =-=-=-=-= =-=-=-=-= Iteration 90 Wed Jan 1 20:53:56 2025 =-=-=-=-= > > ## Plot all model state components. > plot(model, "comp") Error in apply(curves, 2, quantile, probs = qtl, na.rm = TRUE) : dim(X) must have a positive length Calls: plot ... .PlotStateContribution -> PlotDynamicDistribution -> t -> apply Execution halted Flavor: r-release-linux-x86_64

Version: 0.9.10
Check: installed package size
Result: NOTE installed size is 110.8Mb sub-directories of 1Mb or more: libs 109.9Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64